IL_8Q5I_148
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_148 not in the Motif Atlas
- Homologous match to IL_8C3A_398
- Geometric discrepancy: 0.0815
- The information below is about IL_8C3A_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34063.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|A|U|64
8Q5I|1|A|A|65
8Q5I|1|A|U|66
8Q5I|1|A|A|67
8Q5I|1|A|A|68
8Q5I|1|A|G|69
*
8Q5I|1|A|U|82
8Q5I|1|A|G|83
8Q5I|1|A|A|84
8Q5I|1|A|A|85
8Q5I|1|A|A|86
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain H
- 40S ribosomal protein S6
- Chain Z
- 40S ribosomal protein S24
Coloring options: