IL_8Q5I_157

3D structure

PDB id

8Q5I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cephaeline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.45 Å

Loop

Sequence

UAGAG*CAUA

Length

9 nucleotides

Bulged bases

8Q5I|1|A|A|213

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Q5I|1|A|U|210
8Q5I|1|A|A|211
8Q5I|1|A|G|212
8Q5I|1|A|A|213
8Q5I|1|A|G|241
*
8Q5I|1|A|C|248
8Q5I|1|A|A|249
8Q5I|1|A|U|250
8Q5I|1|A|A|251

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4

Chain H

40S ribosomal protein S6

Chain J

40S ribosomal protein S8

Chain M

40S ribosomal protein S11A