IL_8Q5I_211
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- GUAUAAGC*GAAAUC
- Length
- 14 nucleotides
- Bulged bases
- 8Q5I|1|A|A|1503, 8Q5I|1|A|U|1504
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_211 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.5219
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|A|G|1474
8Q5I|1|A|U|1475
8Q5I|1|A|A|1476
8Q5I|1|A|U|1477
8Q5I|1|A|A|1478
8Q5I|1|A|A|1479
8Q5I|1|A|G|1480
8Q5I|1|A|C|1481
*
8Q5I|1|A|G|1500
8Q5I|1|A|A|1501
8Q5I|1|A|A|1502
8Q5I|1|A|A|1503
8Q5I|1|A|U|1504
8Q5I|1|A|C|1505
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein S3
- Chain V
- Ribosomal protein S10
- Chain e
- 40S ribosomal protein S29A
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