3D structure

PDB id
8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Candida albicans 80S ribosome in complex with cephaeline
Experimental method
ELECTRON MICROSCOPY
Resolution
2.45 Å

Loop

Sequence
UCUAGACAGC*GCCGAA
Length
16 nucleotides
Bulged bases
8Q5I|1|1|A|1217
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8Q5I|1|1|U|1214
8Q5I|1|1|C|1215
8Q5I|1|1|U|1216
8Q5I|1|1|A|1217
8Q5I|1|1|G|1218
8Q5I|1|1|A|1219
8Q5I|1|1|C|1220
8Q5I|1|1|A|1221
8Q5I|1|1|G|1222
8Q5I|1|1|C|1223
*
8Q5I|1|1|G|1278
8Q5I|1|1|C|1279
8Q5I|1|1|C|1280
8Q5I|1|1|G|1281
8Q5I|1|1|A|1282
8Q5I|1|1|A|1283

Current chains

Chain 1
25S rRNA

Nearby chains

Chain 0
60S ribosomal protein L20
Chain AN
60S ribosomal protein L40-B

Coloring options:

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