IL_8QBT_034
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8QBT|1|A|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QBT_034 not in the Motif Atlas
- Homologous match to IL_5J7L_277
- Geometric discrepancy: 0.0432
- The information below is about IL_5J7L_277
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
8QBT|1|A|C|998
8QBT|1|A|U|999
8QBT|1|A|A|1000
8QBT|1|A|A|1001
8QBT|1|A|G|1002
*
8QBT|1|A|C|1153
8QBT|1|A|G|1154
8QBT|1|A|A|1155
8QBT|1|A|A|1156
8QBT|1|A|G|1157
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- Large ribosomal subunit protein bL20
- Chain R
- Large ribosomal subunit protein bL21
- Chain Z
- Large ribosomal subunit protein uL30
Coloring options: