IL_8QBT_147

3D structure

PDB id

8QBT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli ApdP-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UGAAAUCCC*GGAACUG

Length

16 nucleotides

Bulged bases

8QBT|1|i|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QBT|1|i|U|605
8QBT|1|i|G|606
8QBT|1|i|A|607
8QBT|1|i|A|608
8QBT|1|i|A|609
8QBT|1|i|U|610
8QBT|1|i|C|611
8QBT|1|i|C|612
8QBT|1|i|C|613
*
8QBT|1|i|G|627
8QBT|1|i|G|628
8QBT|1|i|A|629
8QBT|1|i|A|630
8QBT|1|i|C|631
8QBT|1|i|U|632
8QBT|1|i|G|633

Current chains

Chain i

16S rRNA

Nearby chains

Chain p

Small ribosomal subunit protein uS8

Chain y

Small ribosomal subunit protein uS17