IL_8QBT_183
3D structure
- PDB id
- 8QBT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli ApdP-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8QBT|1|A|U|846, 8QBT|1|A|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QBT_183 not in the Motif Atlas
- Geometric match to IL_5J7L_399
- Geometric discrepancy: 0.1106
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8QBT|1|A|A|844
8QBT|1|A|A|845
8QBT|1|A|U|846
8QBT|1|A|U|847
8QBT|1|A|C|848
*
8QBT|1|A|G|930
8QBT|1|A|U|931
8QBT|1|A|U|932
8QBT|1|A|A|933
8QBT|1|A|U|934
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL30
Coloring options: