IL_8QBT_186

3D structure

PDB id

8QBT (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli ApdP-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

AUGUGUAGGAUAG*CCCUU

Length

18 nucleotides

Bulged bases

8QBT|1|A|G|2112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QBT|1|A|A|2108
8QBT|1|A|U|2109
8QBT|1|A|G|2110
8QBT|1|A|U|2111
8QBT|1|A|G|2112
8QBT|1|A|U|2113
8QBT|1|A|A|2114
8QBT|1|A|G|2115
8QBT|1|A|G|2116
8QBT|1|A|A|2117
8QBT|1|A|U|2118
8QBT|1|A|A|2119
8QBT|1|A|G|2120
*
8QBT|1|A|C|2177
8QBT|1|A|C|2178
8QBT|1|A|C|2179
8QBT|1|A|U|2180
8QBT|1|A|U|2181

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

Transfer RNA; tRNA