IL_8QFD_047

3D structure

PDB id

8QFD (explore in PDB, NAKB, or RNA 3D Hub)

Description

UFL1 E3 ligase bound 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUCCG*CG

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QFD|1|5|C|1686
8QFD|1|5|U|1687
8QFD|1|5|C|1688
8QFD|1|5|C|1712
8QFD|1|5|G|1713
*
8QFD|1|5|C|1833
8QFD|1|5|G|1834

Current chains

Chain 5

28S rRNA

Nearby chains

Chain F

Large ribosomal subunit protein uL30

Chain Q

60S ribosomal protein L18

Chain T

60S ribosomal protein L21

Chain b

60S ribosomal protein L29