IL_8QFD_107
3D structure
- PDB id
- 8QFD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- UFL1 E3 ligase bound 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGGUUCUGGCGCCAAG*CGAC
- Length
- 20 nucleotides
- Bulged bases
- 8QFD|1|5|U|4117, 8QFD|1|5|U|4118, 8QFD|1|5|G|4121
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QFD|1|5|G|4091
8QFD|1|5|G|4092
8QFD|1|5|G|4093
8QFD|1|5|U|4117
8QFD|1|5|U|4118
8QFD|1|5|C|4119
8QFD|1|5|U|4120
8QFD|1|5|G|4121
8QFD|1|5|G|4122
8QFD|1|5|C|4123
8QFD|1|5|G|4124
8QFD|1|5|C|4125
8QFD|1|5|C|4126
8QFD|1|5|A|4127
8QFD|1|5|A|4128
8QFD|1|5|G|4129
*
8QFD|1|5|C|4155
8QFD|1|5|G|4156
8QFD|1|5|A|4157
8QFD|1|5|C|4158
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain G
- 60S ribosomal protein L7a
- Chain Z
- 60S ribosomal protein L27
- Chain c
- 60S ribosomal protein L30
- Chain g
- 60S ribosomal protein L34
- Chain p
- 60S ribosomal protein L37a
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