IL_8QK7_016

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QK7_016 not in the Motif Atlas

Homologous match to IL_4WF9_020

Geometric discrepancy: 0.0682

The information below is about IL_4WF9_020

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

8QK7|1|1|C|672
8QK7|1|1|C|673
8QK7|1|1|G|674
*
8QK7|1|1|C|806
8QK7|1|1|U|807
8QK7|1|1|G|808

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

Large ribosomal subunit protein uL4

Chain L

50S ribosomal protein L15