IL_8QK7_051

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QK7_051 not in the Motif Atlas

Homologous match to IL_5J7L_293

Geometric discrepancy: 0.0907

The information below is about IL_5J7L_293

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

8QK7|1|1|C|1357
8QK7|1|1|G|1358
8QK7|1|1|A|1359
8QK7|1|1|G|1360
8QK7|1|1|G|1361
*
8QK7|1|1|C|1370
8QK7|1|1|G|1371
8QK7|1|1|U|1372
8QK7|1|1|A|1373
8QK7|1|1|G|1374

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL2

Chain d

50S ribosomal protein L34