IL_8QK7_093

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

8QK7|1|1|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QK7_093 not in the Motif Atlas

Homologous match to IL_4WF9_088

Geometric discrepancy: 0.3132

The information below is about IL_4WF9_088

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

8QK7|1|1|U|2401
8QK7|1|1|U|2402
8QK7|1|1|C|2403
*
8QK7|1|1|G|2414
8QK7|1|1|G|2415

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain c

50S ribosomal protein L33

Chain e

50S ribosomal protein L35