IL_8QK7_174
3D structure
- PDB id
- 8QK7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E167K RF2 on E. coli 70S release complex with UAA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- (5MC)AC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 8QK7|1|2|A|1492, 8QK7|1|2|A|1493
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QK7_174 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.1906
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8QK7|1|2|5MC|1407
8QK7|1|2|A|1408
8QK7|1|2|C|1409
*
8QK7|1|2|G|1491
8QK7|1|2|A|1492
8QK7|1|2|A|1493
8QK7|1|2|G|1494
Current chains
- Chain 2
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- mRNA
- Chain 6
- Peptide chain release factor RF2
- Chain q
- Small ribosomal subunit protein uS12
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