IL_8QOA_005

3D structure

PDB id

8QOA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SecM-stalled Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

CGAACGG*CGAGUG

Length

13 nucleotides

Bulged bases

8QOA|1|A|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOA|1|A|C|63
8QOA|1|A|G|64
8QOA|1|A|A|65
8QOA|1|A|A|66
8QOA|1|A|C|67
8QOA|1|A|G|68
8QOA|1|A|G|69
*
8QOA|1|A|C|99
8QOA|1|A|G|100
8QOA|1|A|A|101
8QOA|1|A|G|102
8QOA|1|A|U|103
8QOA|1|A|G|104

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20