IL_8QOA_018

3D structure

PDB id

8QOA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SecM-stalled Escherichia coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOA|1|A|U|409
8QOA|1|A|G|410
8QOA|1|A|A|411
8QOA|1|A|A|412
8QOA|1|A|G|413
8QOA|1|A|A|414
8QOA|1|A|A|415
8QOA|1|A|G|416
8QOA|1|A|G|417
*
8QOA|1|A|U|426
8QOA|1|A|U|427
8QOA|1|A|G|428
8QOA|1|A|U|429
8QOA|1|A|A|430
8QOA|1|A|A|431
8QOA|1|A|A|432
8QOA|1|A|G|433

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4