IL_8QOA_154
3D structure
- PDB id
- 8QOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SecM-stalled Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CA*UACG
- Length
- 6 nucleotides
- Bulged bases
- 8QOA|1|a|A|2572, 8QOA|1|a|C|2573
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QOA_154 not in the Motif Atlas
- Homologous match to IL_5J7L_341
- Geometric discrepancy: 0.0509
- The information below is about IL_5J7L_341
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
8QOA|1|a|C|2512
8QOA|1|a|A|2513
*
8QOA|1|a|U|2571
8QOA|1|a|A|2572
8QOA|1|a|C|2573
8QOA|1|a|G|2574
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Secretion monitor
- Chain Y
- Transfer RNA; tRNA
- Chain d
- Large ribosomal subunit protein uL3
- Chain i
- Large ribosomal subunit protein uL13
Coloring options: