IL_8QOA_157
3D structure
- PDB id
- 8QOA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SecM-stalled Escherichia coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8QOA|1|a|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QOA_157 not in the Motif Atlas
- Geometric match to IL_7RQB_101
- Geometric discrepancy: 0.0744
- The information below is about IL_7RQB_101
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
8QOA|1|a|C|2591
8QOA|1|a|G|2592
*
8QOA|1|a|C|2601
8QOA|1|a|A|2602
8QOA|1|a|G|2603
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 6
- Secretion monitor
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
- Chain v
- Large ribosomal subunit protein bL27
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