IL_8QOI_029

3D structure

PDB id

8QOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

GUGUCGGCGG*CCCCGACC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOI|1|L5|G|491
8QOI|1|L5|U|492
8QOI|1|L5|G|493
8QOI|1|L5|U|494
8QOI|1|L5|C|495
8QOI|1|L5|G|496
8QOI|1|L5|G|497
8QOI|1|L5|C|498
8QOI|1|L5|G|499
8QOI|1|L5|G|500
*
8QOI|1|L5|C|655
8QOI|1|L5|C|656
8QOI|1|L5|C|657
8QOI|1|L5|C|658
8QOI|1|L5|G|659
8QOI|1|L5|A|660
8QOI|1|L5|C|661
8QOI|1|L5|C|662

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LC

Large ribosomal subunit protein uL4