IL_8QOI_040

3D structure

PDB id

8QOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

UCCCGG*CCGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOI|1|L5|U|989
8QOI|1|L5|C|990
8QOI|1|L5|C|991
8QOI|1|L5|C|992
8QOI|1|L5|G|993
8QOI|1|L5|G|994
*
8QOI|1|L5|C|1049
8QOI|1|L5|C|1050
8QOI|1|L5|G|1051
8QOI|1|L5|G|1064

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LE

Large ribosomal subunit protein eL6