IL_8QOI_070
3D structure
- PDB id
- 8QOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.9 Å
Loop
- Sequence
- CGGUAAA*UU(PSU)AAAUG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QOI|1|L5|C|1732
8QOI|1|L5|G|1733
8QOI|1|L5|G|1734
8QOI|1|L5|U|1735
8QOI|1|L5|A|1736
8QOI|1|L5|A|1737
8QOI|1|L5|A|1738
*
8QOI|1|L5|U|1790
8QOI|1|L5|U|1791
8QOI|1|L5|PSU|1792
8QOI|1|L5|A|1793
8QOI|1|L5|A|1794
8QOI|1|L5|A|1795
8QOI|1|L5|U|1796
8QOI|1|L5|G|1797
Current chains
- Chain L5
- 28S rRNA (3773-MER)
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- Large ribosomal subunit protein uL18
- Chain LF
- Large ribosomal subunit protein uL30
- Chain LI
- 60S ribosomal protein L10-like
- Chain LS
- 60S ribosomal protein L18a
- Chain LT
- 60S ribosomal protein L21
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