IL_8QOI_204
3D structure
- PDB id
- 8QOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.9 Å
Loop
- Sequence
- UGGAUAAC*GCUAA(OMU)A(OMC)A
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QOI|1|S2|U|144
8QOI|1|S2|G|145
8QOI|1|S2|G|146
8QOI|1|S2|A|147
8QOI|1|S2|U|148
8QOI|1|S2|A|149
8QOI|1|S2|A|150
8QOI|1|S2|C|151
*
8QOI|1|S2|G|167
8QOI|1|S2|C|168
8QOI|1|S2|U|169
8QOI|1|S2|A|170
8QOI|1|S2|A|171
8QOI|1|S2|OMU|172
8QOI|1|S2|A|173
8QOI|1|S2|OMC|174
8QOI|1|S2|A|175
Current chains
- Chain S2
- 18S rRNA (1740-MER)
Nearby chains
- Chain LW
- 60S ribosomal protein L24
- Chain SG
- 40S ribosomal protein S6
- Chain SY
- 40S ribosomal protein S24
Coloring options: