IL_8QOI_302

3D structure

PDB id

8QOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome at 1.9 A resolution - the molecular role of chemical modifications and ions in RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.9 Å

Loop

Sequence

UCUUGGGG*CUCAA

Length

13 nucleotides

Bulged bases

8QOI|1|L5|U|1757, 8QOI|1|L5|G|1760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QOI|1|L5|U|1754
8QOI|1|L5|C|1755
8QOI|1|L5|U|1756
8QOI|1|L5|U|1757
8QOI|1|L5|G|1758
8QOI|1|L5|G|1759
8QOI|1|L5|G|1760
8QOI|1|L5|G|1761
*
8QOI|1|L5|C|1772
8QOI|1|L5|U|1773
8QOI|1|L5|C|1774
8QOI|1|L5|A|1775
8QOI|1|L5|A|1776

Current chains

Chain L5

28S rRNA (3773-MER)

Nearby chains

Chain LD

Large ribosomal subunit protein uL18

Chain LI

60S ribosomal protein L10-like