IL_8QP9_009
3D structure
- PDB id
- 8QP9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of Pre-B+AMPPNP Complex (core part)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CAGAUCGCAUA*UCCGUG
- Length
- 17 nucleotides
- Bulged bases
- 8QP9|1|5|G|20, 8QP9|1|5|U|22, 8QP9|1|5|C|25
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QP9|1|5|C|18
8QP9|1|5|A|19
8QP9|1|5|G|20
8QP9|1|5|A|21
8QP9|1|5|U|22
8QP9|1|5|C|23
8QP9|1|5|G|24
8QP9|1|5|C|25
8QP9|1|5|A|26
8QP9|1|5|U|27
8QP9|1|5|A|28
*
8QP9|1|5|U|54
8QP9|1|5|C|55
8QP9|1|5|C|56
8QP9|1|5|G|57
8QP9|1|5|U|58
8QP9|1|5|G|59
Current chains
- Chain 5
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain C
- 116 kDa U5 small nuclear ribonucleoprotein component
- Chain N
- Pre-mRNA-processing factor 6
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