IL_8QPP_014

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAGUUG*CAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QPP_014 not in the Motif Atlas

Homologous match to IL_6CZR_357

Geometric discrepancy: 0.4685

The information below is about IL_6CZR_357

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QPP|1|A|U|257
8QPP|1|A|A|258
8QPP|1|A|G|259
8QPP|1|A|U|260
8QPP|1|A|U|261
8QPP|1|A|G|262
*
8QPP|1|A|C|280
8QPP|1|A|A|281
8QPP|1|A|A|282
8QPP|1|A|G|283

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain Q

30S ribosomal protein S17