IL_8QPP_039
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_039 not in the Motif Atlas
- Homologous match to IL_5J7L_037
- Geometric discrepancy: 0.0982
- The information below is about IL_5J7L_037
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
8QPP|1|A|C|788
8QPP|1|A|G|789
8QPP|1|A|A|790
8QPP|1|A|A|791
8QPP|1|A|C|792
*
8QPP|1|A|G|808
8QPP|1|A|G|809
8QPP|1|A|U|810
8QPP|1|A|A|811
8QPP|1|A|G|812
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain K
- 30S ribosomal protein S11
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: