3D structure

PDB id
8QPP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis MutS2-collided disome complex (stalled 70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GUGCAUGG*UCAUCAUGC
Length
17 nucleotides
Bulged bases
8QPP|1|A|C|1064, 8QPP|1|A|A|1210
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QPP|1|A|G|1061
8QPP|1|A|U|1062
8QPP|1|A|G|1063
8QPP|1|A|C|1064
8QPP|1|A|A|1065
8QPP|1|A|U|1066
8QPP|1|A|G|1067
8QPP|1|A|G|1068
*
8QPP|1|A|U|1208
8QPP|1|A|C|1209
8QPP|1|A|A|1210
8QPP|1|A|U|1211
8QPP|1|A|C|1212
8QPP|1|A|A|1213
8QPP|1|A|U|1214
8QPP|1|A|G|1215
8QPP|1|A|C|1216

Current chains

Chain A
16S rRNA (1533-MER)

Nearby chains

Chain C
30S ribosomal protein S3
Chain J
30S ribosomal protein S10
Chain N
30S ribosomal protein S14 type Z

Coloring options:

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