IL_8QPP_061

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

8QPP|1|A|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QPP_061 not in the Motif Atlas

Geometric match to IL_8UO6_002

Geometric discrepancy: 0.2676

The information below is about IL_8UO6_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

8QPP|1|A|C|1416
8QPP|1|A|A|1417
8QPP|1|A|C|1418
*
8QPP|1|A|G|1501
8QPP|1|A|A|1502
8QPP|1|A|A|1503
8QPP|1|A|G|1504

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain L

30S ribosomal protein S12

Chain X

Large subunit ribosomal RNA; LSU rRNA