IL_8QPP_110
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUG*CGC
- Length
- 7 nucleotides
- Bulged bases
- 8QPP|1|X|U|1079
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_110 not in the Motif Atlas
- Homologous match to IL_7RQB_041
- Geometric discrepancy: 0.1185
- The information below is about IL_7RQB_041
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_43275.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
8QPP|1|X|G|1077
8QPP|1|X|A|1078
8QPP|1|X|U|1079
8QPP|1|X|G|1080
*
8QPP|1|X|C|1167
8QPP|1|X|G|1168
8QPP|1|X|C|1169
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain Y
- 5S ribosomal RNA; 5S rRNA
- Chain d
- Large ribosomal subunit protein uL6
- Chain j
- Large ribosomal subunit protein uL16
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