IL_8QPP_164

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QPP_164 not in the Motif Atlas

Geometric match to IL_3OXE_003

Geometric discrepancy: 0.3101

The information below is about IL_3OXE_003

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

8QPP|1|X|U|2486
8QPP|1|X|U|2487
8QPP|1|X|A|2488
*
8QPP|1|X|U|2522
8QPP|1|X|G|2523

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain j

Large ribosomal subunit protein uL16

Chain u

Large ribosomal subunit protein bL27