IL_8QPP_196

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAUGUUGGUAC*GUAUUGACCUUC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QPP|1|X|G|2122
8QPP|1|X|A|2123
8QPP|1|X|A|2124
8QPP|1|X|U|2125
8QPP|1|X|G|2126
8QPP|1|X|U|2127
8QPP|1|X|U|2128
8QPP|1|X|G|2129
8QPP|1|X|G|2130
8QPP|1|X|U|2131
8QPP|1|X|A|2132
8QPP|1|X|C|2133
*
8QPP|1|X|G|2214
8QPP|1|X|U|2215
8QPP|1|X|A|2216
8QPP|1|X|U|2217
8QPP|1|X|U|2218
8QPP|1|X|G|2219
8QPP|1|X|A|2220
8QPP|1|X|C|2221
8QPP|1|X|C|2222
8QPP|1|X|U|2223
8QPP|1|X|U|2224
8QPP|1|X|C|2225

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 9

50S ribosomal protein L9

Chain Z

Large ribosomal subunit protein uL2