IL_8QRM_018
3D structure
- PDB id
- 8QRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- UAAAACU*ACACAAA
- Length
- 14 nucleotides
- Bulged bases
- 8QRM|1|A|C|1011
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRM|1|A|U|974
8QRM|1|A|A|975
8QRM|1|A|A|976
8QRM|1|A|A|977
8QRM|1|A|A|978
8QRM|1|A|C|979
8QRM|1|A|U|980
*
8QRM|1|A|A|1008
8QRM|1|A|C|1009
8QRM|1|A|A|1010
8QRM|1|A|C|1011
8QRM|1|A|A|1012
8QRM|1|A|A|1013
8QRM|1|A|A|1014
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain E
- 28S ribosomal protein S6, mitochondrial
- Chain I
- 28S ribosomal protein S11, mitochondrial
- Chain P
- 28S ribosomal protein S18c, mitochondrial
- Chain Q
- 28S ribosomal protein S21, mitochondrial
Coloring options: