IL_8QRN_016
3D structure
- PDB id
- 8QRN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU in GTPBP8 knock-out cells, state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UGGUCAAUUU*AUUA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRN|1|A|U|876
8QRN|1|A|G|877
8QRN|1|A|G|878
8QRN|1|A|U|879
8QRN|1|A|C|880
8QRN|1|A|A|881
8QRN|1|A|A|882
8QRN|1|A|U|883
8QRN|1|A|U|884
8QRN|1|A|U|885
*
8QRN|1|A|A|910
8QRN|1|A|U|911
8QRN|1|A|U|912
8QRN|1|A|A|913
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain D
- 28S ribosomal protein S5, mitochondrial
- Chain J
- 28S ribosomal protein S12, mitochondrial
- Chain O
- 28S ribosomal protein S18b, mitochondrial
- Chain Z
- 28S ribosomal protein S33, mitochondrial
Coloring options: