IL_8QRN_030
3D structure
- PDB id
- 8QRN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU in GTPBP8 knock-out cells, state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- CAUAUCC*GGCCCUG
- Length
- 14 nucleotides
- Bulged bases
- 8QRN|1|A|A|1188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRN|1|A|C|1185
8QRN|1|A|A|1186
8QRN|1|A|U|1187
8QRN|1|A|A|1188
8QRN|1|A|U|1189
8QRN|1|A|C|1190
8QRN|1|A|C|1191
*
8QRN|1|A|G|1463
8QRN|1|A|G|1464
8QRN|1|A|C|1465
8QRN|1|A|C|1466
8QRN|1|A|C|1467
8QRN|1|A|U|1468
8QRN|1|A|G|1469
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain 5
- fMet-tRNAMet
- Chain F
- 28S ribosomal protein S7, mitochondrial
- Chain G
- 28S ribosomal protein S9, mitochondrial
Coloring options: