IL_8QSJ_009

3D structure

PDB id

8QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QSJ_009 not in the Motif Atlas

Geometric match to IL_4KNQ_003

Geometric discrepancy: 0.1355

The information below is about IL_4KNQ_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8QSJ|1|A|G|1913
8QSJ|1|A|A|1914
8QSJ|1|A|C|1915
*
8QSJ|1|A|G|2004
8QSJ|1|A|C|2005
8QSJ|1|A|C|2006

Current chains

Chain A

16S rRNA

Nearby chains

Chain 2

39S ribosomal protein L34, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial