IL_8QSJ_023

3D structure

PDB id

8QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAAAA*UA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QSJ_023 not in the Motif Atlas

Geometric match to IL_9E6Q_061

Geometric discrepancy: 0.2247

The information below is about IL_9E6Q_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

8QSJ|1|A|U|2456
8QSJ|1|A|A|2457
8QSJ|1|A|A|2458
8QSJ|1|A|A|2459
8QSJ|1|A|A|2460
*
8QSJ|1|A|U|2667
8QSJ|1|A|A|2668

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

39S ribosomal protein L3, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial