3D structure

PDB id
8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
8QSJ|1|A|C|2414, 8QSJ|1|A|C|2415, 8QSJ|1|A|U|2416, 8QSJ|1|A|C|2417
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QSJ|1|A|G|2377
8QSJ|1|A|C|2378
8QSJ|1|A|C|2379
8QSJ|1|A|C|2380
8QSJ|1|A|A|2381
*
8QSJ|1|A|U|2411
8QSJ|1|A|A|2412
8QSJ|1|A|C|2413
8QSJ|1|A|C|2414
8QSJ|1|A|C|2415
8QSJ|1|A|U|2416
8QSJ|1|A|C|2417
8QSJ|1|A|A|2418
8QSJ|1|A|C|2419

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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