3D structure

PDB id
8QSJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
8QSJ|1|A|C|2393, 8QSJ|1|A|U|2404, 8QSJ|1|A|C|2405, 8QSJ|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QSJ|1|A|A|2384
8QSJ|1|A|U|2385
8QSJ|1|A|C|2386
8QSJ|1|A|U|2387
8QSJ|1|A|A|2388
8QSJ|1|A|C|2389
8QSJ|1|A|A|2390
8QSJ|1|A|A|2391
8QSJ|1|A|U|2392
8QSJ|1|A|C|2393
8QSJ|1|A|A|2394
8QSJ|1|A|A|2395
8QSJ|1|A|C|2396
8QSJ|1|A|C|2397
8QSJ|1|A|A|2398
8QSJ|1|A|A|2399
8QSJ|1|A|C|2400
*
8QSJ|1|A|G|2403
8QSJ|1|A|U|2404
8QSJ|1|A|C|2405
8QSJ|1|A|A|2406
8QSJ|1|A|U|2407
8QSJ|1|A|U|2408

Current chains

Chain A
16S rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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