IL_8R09_011
3D structure
- PDB id
- 8R09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the cross-exon pre-B+5'ss+ATPgammaS complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UCUGUU*AUGUCA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R09|1|2|U|39
8R09|1|2|C|40
8R09|1|2|U|41
8R09|1|2|G|42
8R09|1|2|U|43
8R09|1|2|U|44
*
8R09|1|Z|A|30
8R09|1|Z|U|31
8R09|1|Z|G|32
8R09|1|Z|U|33
8R09|1|Z|C|34
8R09|1|Z|A|35
Current chains
- Chain 2
- U2 snRNA
- Chain Z
- pre-mRNA
Nearby chains
- Chain 8
- Splicing factor 3A subunit 2
- Chain 9
- Splicing factor 3A subunit 3
- Chain B1
- Splicing factor 3B subunit 1
- Chain B2
- Splicing factor 3B subunit 2
Coloring options: