IL_8R6C_046
3D structure
- PDB id
- 8R6C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 8R6C|1|A|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R6C_046 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.0766
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
8R6C|1|A|U|1052
8R6C|1|A|G|1053
8R6C|1|A|C|1054
8R6C|1|A|A|1055
8R6C|1|A|U|1056
*
8R6C|1|A|A|1204
8R6C|1|A|U|1205
8R6C|1|A|G|1206
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
- Chain X
- mRNA
- Chain Y
- Transfer RNA; tRNA
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