IL_8R8M_083
3D structure
- PDB id
- 8R8M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UU*GGA
- Length
- 5 nucleotides
- Bulged bases
- 8R8M|1|a|G|729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R8M_083 not in the Motif Atlas
- Geometric match to IL_5J7L_262
- Geometric discrepancy: 0.0474
- The information below is about IL_5J7L_262
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.13
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
8R8M|1|a|U|702
8R8M|1|a|U|703
*
8R8M|1|a|G|728
8R8M|1|a|G|729
8R8M|1|a|A|730
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: