IL_8R8M_106
3D structure
- PDB id
- 8R8M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUAAG*UAUC
- Length
- 9 nucleotides
- Bulged bases
- 8R8M|1|a|A|1205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R8M_106 not in the Motif Atlas
- Homologous match to IL_5J7L_287
- Geometric discrepancy: 0.0529
- The information below is about IL_5J7L_287
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91920.1
- Basepair signature
- cWW-cWW-tHH-cWW
- Number of instances in this motif group
- 1
Unit IDs
8R8M|1|a|G|1202
8R8M|1|a|U|1203
8R8M|1|a|A|1204
8R8M|1|a|A|1205
8R8M|1|a|G|1206
*
8R8M|1|a|U|1240
8R8M|1|a|A|1241
8R8M|1|a|U|1242
8R8M|1|a|C|1243
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- Large ribosomal subunit protein uL4
- Chain k
- 50S ribosomal protein L15
Coloring options: