IL_8RCL_009

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2812

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

8RCL|1|72|C|274
8RCL|1|72|C|275
8RCL|1|72|U|276
8RCL|1|72|G|277
8RCL|1|72|A|278
8RCL|1|72|A|279
8RCL|1|72|U|280
8RCL|1|72|C|281
*
8RCL|1|72|G|359
8RCL|1|72|U|360
8RCL|1|72|G|361
8RCL|1|72|A|362
8RCL|1|72|G|363

Current chains

Chain 72

23S ribosomal RNA

Nearby chains