IL_8RCL_029

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_029 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.1634

The information below is about IL_5J7L_274

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8RCL|1|72|G|875
8RCL|1|72|C|876
8RCL|1|72|A|877
8RCL|1|72|A|878
8RCL|1|72|G|879
*
8RCL|1|72|C|898
8RCL|1|72|A|899
8RCL|1|72|A|900
8RCL|1|72|C|901
8RCL|1|72|C|902

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain Y2

Transfer RNA; tRNA

Chain h2

50S ribosomal protein L16