IL_8RCL_035

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

8RCL|1|72|A|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_035 not in the Motif Atlas

Homologous match to IL_4WF9_039

Geometric discrepancy: 0.1574

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

8RCL|1|72|U|1018
8RCL|1|72|U|1019
8RCL|1|72|A|1020
8RCL|1|72|A|1021
8RCL|1|72|G|1022
8RCL|1|72|U|1023
8RCL|1|72|G|1024
*
8RCL|1|72|C|1140
8RCL|1|72|U|1141
8RCL|1|72|A|1142
8RCL|1|72|A|1143
8RCL|1|72|A|1144

Current chains

Chain 72

23S ribosomal RNA

Nearby chains