IL_8RCL_050

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGAGG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_050 not in the Motif Atlas

Homologous match to IL_5J7L_293

Geometric discrepancy: 0.0839

The information below is about IL_5J7L_293

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

8RCL|1|72|C|1357
8RCL|1|72|G|1358
8RCL|1|72|A|1359
8RCL|1|72|G|1360
8RCL|1|72|G|1361
*
8RCL|1|72|C|1370
8RCL|1|72|G|1371
8RCL|1|72|U|1372
8RCL|1|72|A|1373
8RCL|1|72|G|1374

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 12

50S ribosomal protein L28

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34