IL_8RCL_131

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_131 not in the Motif Atlas

Homologous match to IL_4LFB_013

Geometric discrepancy: 0.183

The information below is about IL_4LFB_013

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

8RCL|1|A1|G|292
8RCL|1|A1|G|293
*
8RCL|1|A1|U|304
8RCL|1|A1|G|305
8RCL|1|A1|A|306
8RCL|1|A1|C|307
8RCL|1|A1|C|308

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain L1

Small ribosomal subunit protein uS12

Chain P1

30S ribosomal protein S16