IL_8RCL_159

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGGG*UUG

Length

7 nucleotides

Bulged bases

8RCL|1|A1|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_159 not in the Motif Atlas

Geometric match to IL_3GM7_003

Geometric discrepancy: 0.2061

The information below is about IL_3GM7_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

213

Unit IDs

8RCL|1|A1|C|924
8RCL|1|A1|G|925
8RCL|1|A1|G|926
8RCL|1|A1|G|927
*
8RCL|1|A1|U|1390
8RCL|1|A1|U|1391
8RCL|1|A1|G|1392

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain E1

Small ribosomal subunit protein uS5

Chain V2

messenger RNA