IL_8RCL_255

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GUU*AGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_255 not in the Motif Atlas

Geometric match to IL_4E59_001

Geometric discrepancy: 0.1493

The information below is about IL_4E59_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8RCL|1|W|G|10
8RCL|1|W|U|11
8RCL|1|W|U|12
*
8RCL|1|W|A|23
8RCL|1|W|G|24
8RCL|1|W|C|25

Current chains

Chain W

tRNA-Trp (P-site)

Nearby chains

Chain 72

Large subunit ribosomal RNA; LSU rRNA

Chain M2

Small ribosomal subunit protein uS13