IL_8RCL_263

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACC

Length

37 nucleotides

Bulged bases

8RCL|1|72|G|2133, 8RCL|1|72|C|2164, 8RCL|1|72|A|2171, 8RCL|1|72|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RCL|1|72|G|2123
8RCL|1|72|G|2124
8RCL|1|72|G|2125
8RCL|1|72|A|2126
8RCL|1|72|G|2127
8RCL|1|72|G|2128
8RCL|1|72|C|2129
8RCL|1|72|U|2130
8RCL|1|72|U|2131
8RCL|1|72|U|2132
8RCL|1|72|G|2133
8RCL|1|72|A|2134
8RCL|1|72|A|2135
8RCL|1|72|G|2136
8RCL|1|72|U|2137
*
8RCL|1|72|A|2154
8RCL|1|72|U|2155
8RCL|1|72|G|2156
8RCL|1|72|G|2157
8RCL|1|72|A|2158
8RCL|1|72|G|2159
8RCL|1|72|C|2160
8RCL|1|72|C|2161
8RCL|1|72|G|2162
8RCL|1|72|A|2163
8RCL|1|72|C|2164
8RCL|1|72|C|2165
8RCL|1|72|U|2166
8RCL|1|72|U|2167
8RCL|1|72|G|2168
8RCL|1|72|A|2169
8RCL|1|72|A|2170
8RCL|1|72|A|2171
8RCL|1|72|U|2172
8RCL|1|72|A|2173
8RCL|1|72|C|2174
8RCL|1|72|C|2175

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain X2

Transfer RNA; tRNA

Chain a2

Large ribosomal subunit protein uL1